Interface Summary |
IAbout |
Display brief information about Xholon and the current Xholon application. |
ICellontro2Sbml |
Transforms a Cellontro model to SBML format. |
IChartViewer |
This interface should be implemented by concrete classes that capture data and display the data in a chart. |
IGraphicalNetworkViewer |
Interface for a graphical network viewer, for example AbstractNetworkViewerJung. |
IGraphicalTreeViewer |
Interface for a graphical tree viewer, for example TreeViewerJung. |
IGridPanel |
A graphic panel in which to display 2D grids. |
IHistogramViewer |
This interface should be implemented by concrete classes that capture data,
and display the data in a histogram. |
ISbml2Cellontro |
ISbml2Cellontro transforms SBML files into Xholon/Cellontro model files. |
ISnapshot |
Take a shapshot of an entire Xholon tree. |
IViewer |
All Xholon viewer interfaces should extend this interface. |
IXholon2Qep |
Output Java file(s) in Quantum Event Processor (QEP) format. |
IXholon2Scxml |
Output an XML file in SCXML format. |
IXholon2Smc |
Output an XML file in SMC format. |
IXmi2Xholon |
Transform XMI-formatted files into Xholon format. |
Class Summary |
About |
Display brief information about Xholon and the current Xholon application. |
AbstractChartViewer |
This is the abstract superclass for concrete classes that capture data and display the data in a chart. |
AbstractHistogramViewer |
This is the abstract superclass for concrete classes that capture data and display the data in a histogram. |
AbstractNetworkViewerJung |
Graphical network viewer constructed using the JUNG software. |
ChartViewerGnuplot |
Captures data, and creates a script to display the data in a gnuplot chart. |
ChartViewerJFreeChart |
Captures data, and creates a chart using JFreeChart. |
GridFrame |
A frame in which to display 2D grids. |
GridPanel |
A graphic panel in which to display 2D grids. |
HistogramViewerGnuplot |
Captures data, and creates a histogram using gnuplot. |
HistogramViewerJFreeChart |
Captures data, and creates a histogram using JFreeChart. |
NetworkViewerJung |
Graphical network viewer constructed using the JUNG software. |
Snapshot |
Take a shapshot of an entire Xholon tree. |
SnapshotXML |
Take a shapshot of an entire Xholon tree. |
SnapshotYAML |
Take a shapshot of an entire Xholon tree. |
TreeViewerJung |
Graphical tree viewer constructed using the JUNG software. |
Xholon2Qep |
Export an executing Xholon application as an Java file in Quantum Event Processor (QEP) format. |
Xholon2Scxml |
Export an executing Xholon application as an XML file in SCXML format. |
Xholon2Smc |
Export an executing Xholon application as an XML file in SMC format. |
XholonAppWizardGui |
Execute the Xholon application wizard in a graphical window. |
XholonGui |
Optional GUI for a Xholon application. |
Xmi2Xholon |
Transform XMI-formatted files into Xholon format. |