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java.lang.Object org.primordion.xholon.base.Xholon org.primordion.xholon.app.Application org.primordion.cellontro.app.AppCell
Cell Model.
This simulation of a biological cell includes enzymes that continuously transform substrate chemicals into products, and lipid bilayers and transport proteins that move chemicals between compartments.
For more information on this model, see:
Webb, K., & White, T. (2005). UML as a cell and biochemistry modeling language. BioSystems, 80, 283–302.
Webb, K., & White, T. (2004). Cell Modeling using Agent-based Formalisms. AAMAS 2004, New York.
Nested Class Summary |
Nested classes inherited from class org.primordion.xholon.app.Application |
Application.GridViewerDetails |
Field Summary |
Fields inherited from class org.primordion.xholon.base.Xholon |
DEFAULT_LEVEL, interaction, interactionsEnabled |
Fields inherited from interface org.primordion.xholon.base.IXholon |
DEFAULT_SIZE_MSG_Q, NINCLUDE_PSC, NINCLUDE_PSx, NINCLUDE_PxC, NINCLUDE_Pxx, NINCLUDE_xSC, NINCLUDE_xSx, NINCLUDE_xxC, NINCLUDE_xxx |
Constructor Summary | |
AppCell()
Constructor. |
Method Summary | |
void |
about()
Display brief information about Xholon and the application. |
void |
initialize(java.lang.String configFileName)
Initialize the application. |
static void |
main(java.lang.String[] args)
main |
void |
wrapup()
Wrapup any unfinished business in the application. |
Methods inherited from class java.lang.Object |
equals, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Constructor Detail |
public AppCell()
Method Detail |
public void initialize(java.lang.String configFileName)
IApplication
initialize
in interface IApplication
initialize
in class Application
public void wrapup()
IApplication
wrapup
in interface IApplication
wrapup
in class Application
public void about()
IApplication
about
in interface IApplication
about
in class Application
public static void main(java.lang.String[] args)
args
- One optional command line argument.
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